“生而愚钝，未有兼人之贤。”

本人长期从事环境微生物学研究，研究方向主要有土壤碳氮循环及其微生物学机制、病原微生物的拮抗机制及其检测技术、脆弱区生态系统的养分供应机制等方面。目前的研究成果主要集中在大气CO₂升高条件下土壤微生物的分子生态学响应机制；土壤微生物学技术在可持续发展农业中的应用；稳定同位素示踪技术在氮元素循环中机理的研究。先后主持参与了国家自然科学基金十余项，在中英文期刊上发表论文27篇，其中第一作者和通讯作者13篇。近来我们团队在致力于利用基于高通量测序的基因组学、转录组学和代谢组学等技术深入揭示各领域中前沿科学问题的微生物学机制，同时也尝试将现有的成熟微生物学理论和工程技术应用于农业、医药、文保领域中，响应国家需求，积极参与校企合作和工程实践，发挥社会主义螺丝钉作用。

 

教育和工作经历

（1）南京信息工程大学，专任教师

（2）Newcastle University (UK)，访问学者

（3）中国科学院南京土壤研究所，博士后

（4）南京师范大学，微生物学，理学博士

（5）南京师范大学，环境科学，理学学士

 

• 教学工作

“依锄望，处处有青青禾苗。” ——育人终生目标。

 课程教学：《微生物学》、《普通生物学》、《水处理生物学》、《无机及分析化学》、《学科前沿》、《专业导论》、《物质循环与全球变化》

培养人才：热心于指导本科生、研究生工作，担任班主任的班级获得校级优秀班集体，指导大学生创新创业项目获得多个奖项。

 

 

• 科研工作

“问渠那得清如许，为有源头活水来。”——科学研究工作原则。

近年来，锚定国家需求，聚焦世界科技前沿，积极开展环境微生物学相关的基础科学和技术应用研究。

主持和参与科研项目：

·国家自然科学基金青年基金项目，大气[CO₂]升高对稻田生态系统中厌氧氨氧化和厌氧甲烷氧化微生物的影响，主持，结题

·国家自然科学基金面上项目，土壤硝化过程自养固碳抵偿N₂O温室效应的微生物机制，参与，在研

·国家自然科学基金面上项目，稻田土壤CH₄厌氧氧化与N₂O还原的耦合机制研究，参与，在研

·国家自然科学基金面上项目，稳定性同位素示踪稻田甲烷产生途径及产甲烷古菌对有机物料输入的适应机制，参与，在研

·国家自然科学基金面上项目，生氮假单胞菌F77风化黑云母过程中的耐酸机制，参与，在研 

·国家自然科学基金面上项目，增温及秸秆施用对农田土壤呼吸的影响及微生物学机制研究，参与，在研

·国家自然科学基金面上项目，细胞壁在植物累积解毒镉中的作用机制研究，参与，结题

 ·国家自然科学基金面上项目，西瓜连作障碍土壤微生物群落结构-功能模型及土壤功能预测，参与，结题

 

主要论文：

第一作者、通讯作者论文：

· Yongjie Yu, Chen Wu, Xin Li, Lingyu Wu, Qinyu Yang, Evangelos Petropoulos, Youzhi Feng*. (2023) The impact of Ag nanoparticles on methane emission in two typical paddy soils. Environmental Pollution, 323: 121215. 

·Xin Li*, Xiao’ai Zhou, Chen Wu, Evangelos Petropoulos, Yongjie Yu*, Youzhi Feng (2023) Temperature and moisture gradients drive the shifts of the bacterial microbiomes in 1000-year-old mausoleums. Atmosphere, 14(1), 14. 

·Yongjie Yu*, Qinyu Yang, Evangelos Petropoulos, Tongbin Zhu (2022) ITS3/ITS4 outperforms other ITS region and 18S rRNA gene primer sets for amplicon sequencing of soil fungi. European Journal of Soil Science, 73, e13329. 

· Nan Rong, Shiying He, Bei Li, Xiangui Lin, Xiaoling Liu, Yongjie Yu*, Youzhi Feng* (2022) Coupled magnetic nanoparticle‐mediated isolation and single‐cell image recognition to detect Bacillus’ body size in soil. European Journal of Soil Science (73), e13236.   

·Qin Lu, Youzhi Feng, N Liu, Song W, Huang Y, Zhang K, Yongjie Yu* (2022) Effect of converting natural forests to plantations on the soil bacterial diversity in a subtropical mountainous area: case study in southern China. Applied Ecology and Environmental Research, 20(4), 2831-2844. 

·Xiao Zhang; Di Dang; Lingsi Zheng; Lingyu Wu; Yu Wu; Haoruo Li & Yongjie Yu*. Effect of Ag nanoparticles on denitrification and microbial community in a paddy soil. Frontiers in Microbiology, 2021, 12, 785439.

·Baogang Mu*, Zheyi Gui, Fei Lu, Evangelos Petropoulos & Yongjie Yu*. Microbial-induced carbonate precipitation improves physical and structural properties of Nanjing ancient city walls. Materials, 2021. 14(19), 5665.

·杨浩宇, 张潇, 党迪, 郑灵斯, 杨沁宇, 于涌杰* (2021) 纳米氧化铁对水稻土CH₄和N₂O排放及微生物的影响. 应用与环境生物学报 27(3), 725-733.

·Yongjie Yu, MengWu, Evangelos Petropoulos, Jianwei Zhang, Jun Nie, Yulin Liao, Zhongpei Li, Xiangui Lin & Youzhi Feng*. Responses of paddy soil bacterial community assembly to different long-term fertilizations in southeast China. Science of the Total Environment, 2019, 656, 625-633.

·Yongjie Yu, Jianwei Zhang, Evangelos Petropoulos, Marcos Q. Baluja, Chunwu Zhu, Jianguo Zhu, Xiangui Lin & Youzhi Feng*. Divergent responses of the diazotrophic microbiome to elevated CO₂ in two rice cultivars.  Frontiers in Microbiology, 2018, 9, 1139.

·Youzhi Feng^#, Yongjie Yu^#, Haoye Tang, Qianhui Zu, Jianguo Zhu, & Xiangui Lin*. The contrasting responses of soil microorganisms in two rice cultivars to elevated ground-level ozone. Environmental Pollution, 2015, 197, 195-202.

·Yongjie Yu, Jinbo Zhang, Wenwen Chen, Wenhui Zhong*, Tongbin Zhu, & Zucong Cai. Effect of land use on the denitrification, abundance of denitrifiers, and total nitrogen gas production in the subtropical region of China. Biology and Fertility of Soils, 2014, 50, 105-113.

·Yongjie Yu, Weishou Shen, Yunfeng Yin, Jinbo Zhang, Zucong Cai, & Wenhui Zhong*.  Response of soil microbial diversity to land-use conversion of natural forests to plantations in a subtropical mountainous area of southern China. Soil Science and Plant Nutrition, 2012, 58, 450-461.

参与作者论文：

· Lei, Sun, Yongjie Yu, Evangelos Petropoulos, Xiaoyang Cui*, and Shuang Wang*. (2023) Long-term manure amendment sustains black soil biodiversity by mitigating acidification induced by chemical N fertilization, Microorganisms, 11: 64. 

 ·Mu, B. G.*, Y. Zhang, Yongjie Yu, and E. Petropoulos. (2022) Biomass material amendment maintained the structure of underground cultural relics by decreasing the variation of soil water content, Applied Ecology and Environmental Research, 20: 801-814. 

· Munk, Patrick, Christian Brinch, Frederik Duus Møller et al. (2022) Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance, Nature Communications, 13: 7251. 

·Wang, Guan, Tongbin Zhu, Jinxing Zhou, Yongjie Yu, Evangelos Petropoulos, and Christoph Müller. (2022) Slash-and-burn in karst regions lowers soil gross nitrogen (N) transformation rates and N-turnover, Geoderma, 425: 116084. 

·Lang, Man, Ping Li, Guangqiang Long, Fujin Yuan, Yongjie Yu, Erdeng Ma, Jun Shan, Christoph Müller, and Tongbin Zhu. (2021) Grazing rest versus no grazing stimulates soil inorganic N turnover in the alpine grasslands of the Qinghai-Tibet plateau, Catena, 204: 105382.

· Petropoulos, Evangelos, Burhan Shamurad, Shamas Tabraiz, Yongjie Yu, Russell Davenport, Thomas P. Curtis, and Jan Dolfing. (2021) Sewage treatment at 4 °C in anaerobic upflow reactors with and without a membrane - performance, function and microbial diversity, Environmental Science: Water Research & Technology, 7: 156-171.

· Petropoulos, Evangelos, Yongjie Yu, Shamas Tabraiz, Aminu Yakubu, Thomas P. Curtisa, and Jan Dolfing. (2019) High rate domestic wastewater treatment at 15°C using anaerobic reactors inoculated with cold-adapted sediments/soils - shaping robust methanogenic communities, Environmental Science: Water Research & Technology, 5: 70-82. 

·Quintela-Baluja, M., M. Abouelnaga, J. Romalde, J. Q. Su, Yongjie Yu, M. Gomez-Lopez, B. Smets, Y. G. Zhu, and D. W. Graham. (2019) Spatial ecology of a wastewater network defines the antibiotic resistance genes in downstream receiving waters, Water Research, 162: 347-357. 

Petropoulos, Evangelos, Jan Dolfing, Yongjie Yu, Matthew J. Wade, Emma J. Bowen, Russell J. Davenporta, and Thomas P. Curtisa. (2018) Lipolysis of domestic wastewater in anaerobic reactors operating at low temperatures, Environmental Science: Water Research & Technology, 4: 1002-1013. 

·Chen, L., J. Xu, Y. Feng, J. Wang, Yongjie Yu, and P. C. Brookes. (2015) Responses of soil microeukaryotic communities to short-term fumigation-incubation revealed by MiSeq amplicon sequencing, Frontiers in Microbiology, 6: 1149. 

·Shan, J., R. Ji, Yongjie Yu, Z. Xie, and X. Yan. (2015) Biochar, activated carbon, and carbon nanotubes have different effects on fate of ¹⁴C-catechol and microbial community in soil, Scientific Reports, 5: 16000. 

·Zhang, Jinbo, Yongjie Yu, Tongbin Zhu, and Zucong Cai. (2014) The mechanisms governing low denitrification capacity and high nitrogen oxide gas emissions in subtropical forest soils in China, Journal of Geophysical Research: Biogeosciences, 119: 1670-1683. 

·Zhang, Jinbo, Zucong Cai, Wenyan Yang, Tongbin Zhu, Yongjie Yu, Xiaoyuan Yan, and Zhongjun Jia. (2012) Long-term field fertilization affects soil nitrogen transformations in a rice-wheat-rotation cropping system, Journal of Plant Nutrition and Soil Science, 175: 939-946. 

 

 

• 社会服务

“但事耕耘，莫问收获。” ——不断加强自身专业的同时，将所学专业知识应用于学科建设和经济建设中。

积极参与管理专业学科的建设与发展。曾担任学院农业资源与环境系副主任，先后圆满完成三届院领导班子交待的院系工作，如管理和检查系教学计划、修订本科生和研究生培养方案、汇编教学大纲、新专业申报、“新农科”改革、硕士点评估、博士点申报、教育部专业评估、协调师生矛盾等工作。

促进国际交流。访问英国纽卡斯尔大学，宣扬中国文化和学校教育理念的同时，团结国内外10多个单位专家进行深入学术交流。

将专业知识服务于生产实践。自2015年以来一直对生物科技有限公司进行技术指导，如分子生物学在医药领域的应用、检测新冠病毒的试剂和仪器研发工作、城市水务的监测物联网、软件大数据、装备集成等方面进行了深入学习、交流和探讨。